GROMACS: Molecular Dynamics Simulation (MDS)

By Akib Hasan Uncategorized
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About Course

💻 3-Day Hands-On Workshop | 🕒 1–1.5 Hours/Day

Course Content

Day 1: Linux Basics & GROMACS Installation

  • Introduction to Molecular Dynamics (MD)
  • Why GROMACS and Linux for MDS?
  • Basic Linux commands: cd, ls, nano, chmod, cp, mv
  • Testing GROMACS installation: gmx -h
  • Practice: Navigate Linux, install GROMACS, and run a sample test

Day 2: Simulation Setup and Execution

Day 3: Trajectory Analysis & Visualisation

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Company Information

Registered Company Name:

Innovative Research Center

Trade License Number:

TRAD/DNCC/047184/2024

TIN Number:

380164652827